PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536995.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 389aa    MW: 42565.9 Da    PI: 7.5009
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.61.5e-17291327135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nCgt++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  XP_023536995.1 291 CTNCGTSSmaTPMMRRGPSGPRSLCNACGLFWANRGT 327
                     *********************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MFFTVHCPFA LLAFLWSPQT QPTLYTVTTH FARHFHIRSS LLPSSLLVGL DSSVFYQFSF  60
RPFLFFFLNF CNVLQTPLIL FLPELMYGRP QPLTVGDQIA SVPDCGDGGE PLDNRLVRYG  120
AHALEDGAGV GGMIEDLNPD AVYASAGDGS DMAIQRSDGS SQLTLSFRGQ VYLFDAVSPE  180
KVQAVLLLLG GSELSSGQQS VDLVTQSQRN AVDFPGRSSQ PQRAASLSRF RQKRKERCFD  240
KKVRYGVRQE VAFRMQRNKG QFTSSKKPDG SYSHGSVSEQ GQEESPLETL CTNCGTSSMA  300
TPMMRRGPSG PRSLCNACGL FWANRGTLRD LSKRSQDHRV TPAGQFESDA AAAAAAPPVK  360
DLDCRQGTHA HSDLVSFSNG DNSALMAEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.37e-79GATA family protein