PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536959.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

GeBP

Protein Properties

Length: 388aa MW: 43772.2 Da PI: 4.4478

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	86.3	3.9e-27	120	216	5	97
DUF573 5 rlwseeDeivlLqGlidfkaktgksps....ddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 +w++eDei lL+G+++f++++ sp+ +d afy+ +k +i++ k+ql++K+rrL++K++ ++k++ g++p+f++ h++++f++s+ki XP_023536959.1 120 TVWTNEDEIQLLRGFLEFASENRISPHrlqqQDAAAFYRRIKPKIQLCCGKNQLLDKLRRLRRKYQITSNKIDCGEKPAFKSLHERSTFDISRKI 214 68*******************976533326************************************************************* PP DUF573 96 Wg 97 Wg XP_023536959.1 215 WG 216 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MTWPLSGWIF SSSSSSSMEE DQNSQPSDEH GVSDDEPGTP LNEEDEEFQA DSYGEDAQND 60 GENAAVSDGV SDETDAADLR QSKTNSFSPI DDRIPSVIAI PANAPNNIVT VAVPPRRRVT 120 VWTNEDEIQL LRGFLEFASE NRISPHRLQQ QDAAAFYRRI KPKIQLCCGK NQLLDKLRRL 180 RRKYQITSNK IDCGEKPAFK SLHERSTFDI SRKIWGRNSG KKQTSVEDSI LDEVLADINP 240 NFIEIQVKTE NLEEDESEER EDYQQLTKRR RTAYLSGEAS NSNEIPARTN SIVDDIGKIS 300 GLVEEVARGC LSPLFKELIS NGWPPVGLAG RIPNCGGGEA GEERWRKQQE LEMEVYLKRL 360 ELVQEEIRVS LEQLRSKEEE SKNNDNNG

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MTWPLSGWIF SSSSSSSMEE DQNSQPSDEH GVSDDEPGTP LNEEDEEFQA DSYGEDAQND  60
GENAAVSDGV SDETDAADLR QSKTNSFSPI DDRIPSVIAI PANAPNNIVT VAVPPRRRVT  120
VWTNEDEIQL LRGFLEFASE NRISPHRLQQ QDAAAFYRRI KPKIQLCCGK NQLLDKLRRL  180
RRKYQITSNK IDCGEKPAFK SLHERSTFDI SRKIWGRNSG KKQTSVEDSI LDEVLADINP  240
NFIEIQVKTE NLEEDESEER EDYQQLTKRR RTAYLSGEAS NSNEIPARTN SIVDDIGKIS  300
GLVEEVARGC LSPLFKELIS NGWPPVGLAG RIPNCGGGEA GEERWRKQQE LEMEVYLKRL  360
ELVQEEIRVS LEQLRSKEEE SKNNDNNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	9e-33	GeBP family protein