PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536897.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 308aa MW: 35170.2 Da PI: 6.0567

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	231	265	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_023536897.1 231 KWPYPSEAEKLALAESTGLDQKQINNWFINQRKRH 265 579*****************************885 PP
2	ELK	36.1	1.4e-12	185	206	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL++LkqE+s XP_023536897.1 185 ELKNHLLKKYSGYLSTLKQELS 206 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MEDQYNPNFH YHHHQQQHQQ VHDFQISSGG SSKDIDIMKA KIISHSQFSN LLQAFLDCKK 60 VGAPAEVAAE LGSVGEEFEE RRRCSMAASG GCSDPELDQF MEGYYRMLVK YREELTKPIQ 120 EAADFMERVE SQLNTLCNGS FQILASDAAT ENRDGMGSSE EELEKGGDGG RDATEQIDPR 180 ADERELKNHL LKKYSGYLST LKQELSKKKK KGKLPKDARQ ELLRWWEVHS KWPYPSEAEK 240 LALAESTGLD QKQINNWFIN QRKRHWKPSE DVQLMGMEGF YHPNTAAAAA AFYFDGHYMG 300 DAHYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-111	TALE family protein