PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536793.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 484aa MW: 52425.1 Da PI: 7.0694

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.3e-32	265	320	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_023536793.1 265 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 320 68****************************************************97 PP
2	Myb_DNA-binding	40.3	7.4e-13	267	318	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_023536793.1 267 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 318 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MPSPPELSLD CKPNSYSMLL KSFVSDQVAM PSQDHTQKQL EDLLSRLEGE RLKIDAFKRE 60 LPLCMQLLTN ALESSRQQLQ ACKGNNIHQN GSKPVLEEFI PLKQSTPEGQ ETISSISDKA 120 NWMISAQLWS QTTNDETKPN LSSSKDAIID HQIGFIPKLQ RNNNNNSNNG GAFHPFSKDR 180 ILSNTQNSNS SQLPDLALAA GCGGDRKEID ENKCVDNSDH HQPENVNLVA GKVNLVGDGQ 240 ITTSNVSSTV ANNNTNNSTN HTHRKARRCW SPDLHRRFVN ALQMLGGSQV ATPKQIRELM 300 KVDGLTNDEV KSHLQKYRLH TRRPSPSPQA AGAPAPQLVV LGGIWVPPEY ATAAAAAAHG 360 GAPALYAPHP TSYCAPPVHQ DFYPPPPPLP HHQLHHQHAL HQQLNMYKAA AAAAAQAQSS 420 PQSEGQGNGG RSESIEDGGK SDSGSWKAES GGENNGGGER KGNLAALRQE AGEESNGSEI 480 TLKF

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MPSPPELSLD CKPNSYSMLL KSFVSDQVAM PSQDHTQKQL EDLLSRLEGE RLKIDAFKRE  60
LPLCMQLLTN ALESSRQQLQ ACKGNNIHQN GSKPVLEEFI PLKQSTPEGQ ETISSISDKA  120
NWMISAQLWS QTTNDETKPN LSSSKDAIID HQIGFIPKLQ RNNNNNSNNG GAFHPFSKDR  180
ILSNTQNSNS SQLPDLALAA GCGGDRKEID ENKCVDNSDH HQPENVNLVA GKVNLVGDGQ  240
ITTSNVSSTV ANNNTNNSTN HTHRKARRCW SPDLHRRFVN ALQMLGGSQV ATPKQIRELM  300
KVDGLTNDEV KSHLQKYRLH TRRPSPSPQA AGAPAPQLVV LGGIWVPPEY ATAAAAAAHG  360
GAPALYAPHP TSYCAPPVHQ DFYPPPPPLP HHQLHHQHAL HQQLNMYKAA AAAAAQAQSS  420
PQSEGQGNGG RSESIEDGGK SDSGSWKAES GGENNGGGER KGNLAALRQE AGEESNGSEI  480
TLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-92	G2-like family protein