PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536624.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 332aa    MW: 37914.4 Da    PI: 8.8278
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.85.7e-36251172103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F+kg+k+ll++
  XP_023536624.1  25 FLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDFFRKGDKHLLCE 110
                     9*****************************************************************99.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+k++
  XP_023536624.1 111 IHRRKTA 117
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MALMVDNCEG VLVSLDSHKP IPAPFLTKTY QLVDDPSTDH IVSWGEDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANDFF RKGDKHLLCE IHRRKTAQPQ  120
LHQSLSPLAL NNPGFYHFHG RGSISPSDSD DQNNWCDSPP LSSSGTNNNN NNNNSVTALS  180
EDNERLRRSN NMLMSELAHM KKLYNDIIYF VQNHVKPVAP SNSYQYSTFP VVQRQPNHHL  240
VGYNNPTNAK QVSGQTHLVT GIPNNNNKNN KSFVRIVEEQ QKTKLFGVAI HSKKRLHPEY  300
ASNNIGKENN NKARFVLEKD DLGLNLMPPS AC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.11e-108HSF family protein