PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536581.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 310aa    MW: 35209.9 Da    PI: 7.1881
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536581.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.61e-5271311128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtd+elv++yL++k++++++++  +i+e+d+yk++PwdLp k+ ++ekewyfFs+rd+ky++g+r+nr++ sgyWkatg dk++ + 
  XP_023536581.1   7 LPPGFRFHPTDDELVTHYLCRKCASQPITV-PIIAEIDLYKYNPWDLPGKALHGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGR- 99 
                     79**************************99.88***************8777889*************************************98. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++g+kk Lvfy g+apkgekt+W+mheyrl
  XP_023536581.1 100 -PKTIGIKKALVFYAGKAPKGEKTNWIMHEYRL 131
                     .778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MAVDLQLPPG FRFHPTDDEL VTHYLCRKCA SQPITVPIIA EIDLYKYNPW DLPGKALHGE  60
KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGRP KTIGIKKALV FYAGKAPKGE  120
KTNWIMHEYR LAHVDRSACK KNSLRLDDWV LCRIYNKKGV IEKQPPPPSP PPQQHHVSIN  180
RPEMNTIGYI ENEDQEEKPE ILNDGAVSGR IPSPSPSQAP PSSGVVNDFM YFEASDSIPR  240
LHADSSCSEQ VVSSEFTCEV QSQPRLKDEY SVFPYNYMDA SMESAFCAQF PTLNQMSPLQ  300
DMFMYLQKPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-133NAC family protein