PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536441.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 385aa MW: 41837.2 Da PI: 10.1107

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536441.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.3e-30	314	371	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYe++Hnh XP_023536441.1 314 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYENDHNHA 371 99**********************998**************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MLLLNNNMAV ELMVGFGDAT TATNFTPKLE ENAAVSAVQE AASAGIQSVQ NFLRLMSHTP 60 NQHHSQHDSS TSTTPNAIAP YDAVADSVVS NFKKVISLLD RNRTGHARFR RAPVLHTPPP 120 PPPPKVKPLQ HQDPSSSSAP QVQVKKQESV SAFKVYCPTP SSVVRLPPLP HNNPHQPSHP 180 PNTFQAQQNT SSVVLKNGSV DRKDPTTTIN FVASPPISAA NSYISSLTGD TESLQPSMSS 240 GFQFTHMSQV SSAGKPPLST SSLKRKCNSM DDSAMKCASS SGRCHCSKKS RKNRIKRVIR 300 VPAVSSKLAD IPPDDYSWRK YGQKPIKGSP HPRGYYKCSS LRGCPARKHV ERALDDPTML 360 IVTYENDHNH AHSTETPATL VLESS

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MLLLNNNMAV ELMVGFGDAT TATNFTPKLE ENAAVSAVQE AASAGIQSVQ NFLRLMSHTP  60
NQHHSQHDSS TSTTPNAIAP YDAVADSVVS NFKKVISLLD RNRTGHARFR RAPVLHTPPP  120
PPPPKVKPLQ HQDPSSSSAP QVQVKKQESV SAFKVYCPTP SSVVRLPPLP HNNPHQPSHP  180
PNTFQAQQNT SSVVLKNGSV DRKDPTTTIN FVASPPISAA NSYISSLTGD TESLQPSMSS  240
GFQFTHMSQV SSAGKPPLST SSLKRKCNSM DDSAMKCASS SGRCHCSKKS RKNRIKRVIR  300
VPAVSSKLAD IPPDDYSWRK YGQKPIKGSP HPRGYYKCSS LRGCPARKHV ERALDDPTML  360
IVTYENDHNH AHSTETPATL VLESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	5e-95	WRKY family protein