PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536391.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 358aa    MW: 39366 Da    PI: 7.0466
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-20174223255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_023536391.1 174 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDKAAFKLRG 223
                     59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MVTAMDFYNE GPQTDHFGGE LMEAILPFMK VASSLSTNLP SSSSSSSSSP APYLPPCTNN  60
HLSFSHSAPQ QSTLYSNGCS TSMNPGFSNG FSTQNLVGFE QPFTIGPHQL SLPQNLHSQP  120
QVNLLQNQTP LPFALEQQNH QPLPCYEQIT PNFLSPKPTP MKQVGSSSKP TNKLYRGVRQ  180
RHWGKWVAEI RLPRNRTRLW LGTFDTAEEA ALAYDKAAFK LRGDSARLNF PHLKHQGSCF  240
EGEFGEYNPL HSSVDAKLQA ICDNLAKPQK QGNSKKPVTA AKKSRSQSCS LADTAAVKVE  300
NSSSRAVTES DGSAASSPLS DLSFPDFTEL PWDQNLAWET SMLEKYPSEI DWASILPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.16e-62ERF family protein