PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536295.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WOX
Protein Properties Length: 271aa    MW: 30981.8 Da    PI: 5.6582
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.34.2e-21101161257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     r+R+t+t+ ql++Le+ F + n +ps++++++++ +l    +++e++V++WFqNrRa+ k+
  XP_023536295.1 101 RQRWTPTPVQLQILERIFDEgNGTPSKQKIKDITLQLiqygQISEANVYNWFQNRRARSKR 161
                     89*****************99**************************************97 PP
2Wus_type_Homeobox100.89.9e-33100163265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ar+RWtPtp Q++iLe+++++G  tP+k++i++it +L +yG+i+++NV++WFQNr+aR+++kq
     XP_023536295.1 100 ARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITLQLIQYGQISEANVYNWFQNRRARSKRKQ 163
                        789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MMEWQNQQQQ QNQTEQLQMQ MQVEQLSNAA DGVGGLYVKV MTDEQMELLR QQISVYASIC  60
DQLVEMHKAI TAQQDLAGMR LGNLYCDPIM ACAAGHKITA RQRWTPTPVQ LQILERIFDE  120
GNGTPSKQKI KDITLQLIQY GQISEANVYN WFQNRRARSK RKQANSVPNN ADSEPETEVD  180
SPKEKKTKPE TFQAYEHFVP KLSNVYSQRS ELGAEILSFD TQTNKGEPMF QSFGSGHISQ  240
MTPTQNHRNN MSNEKMNVPD YSPCEGYHLV E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155163RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.15e-71WOX family protein