PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536274.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 550aa    MW: 61436.3 Da    PI: 4.6848
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS420.61.3e-1281815502374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +e LlecA a+s++++ +a+a++++l+ ++s +gdp qR+aay++e+Laarl+ s++ lykal+++e +   ss++laa+++++ev+P++kf+++
  XP_023536274.1 181 REMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFM 272
                     578*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN aI ea++ e+r+HiiDfd+sqG+Q+++L+q La++p++pp+lR+Tgv++pes+      l+++g+rL+++A++l+vpfef++ +a++++d+
  XP_023536274.1 273 AANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVhrPVGGLKHIGQRLEQLAKALRVPFEFQA-IASNTSDV 366
                     *******************************************************9988999************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++++L+  +gEa++Vn+++ lh+++desvs+ + rd++L++vk+l+Pk+v+vveq++++n+++F+ rf+e+ +y++a++d+l+a+lpr+s++ri+
  XP_023536274.1 367 TPSMLASCHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRDSQDRIN 461
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vEr++l+++ivn++aceg++r+er e ++kWr+r+++aGF++ ++s+++++ ++ l+ ++ ++  ++ ee g++ +gW++++L+ +S Wr
  XP_023536274.1 462 VERQCLAKDIVNIIACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCER-LKMYEEMGTVHFGWEEKSLIITSTWR 550
                     *************************************************************66.9************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
MSLVRPSDLS PLSYGSRKLY SLNGTKNAPD LSAQRFGSEK HRSESYEKYF LDFPIEELSI  60
SGVSGISTNS FHPNAASYGR TDSDSACLES TSPEQLDFED DQVRLKLQEL ERDLLGEPDA  120
ADYDVEMLAN GQAMEIDSEW ANSIKDALLH DSPNESSSTD SNFSTTGSNK DASQMSSQNP  180
REMLLECAFA ISEDNFDEAS AMIEQLRGMV SVQGDPSQRI AAYMVEGLAA RLLASGKCLY  240
KALRCKEPPS SDRLAAMQIL FEVCPCFKFG FMAANCAIIE AAKDEKRIHI IDFDVSQGTQ  300
YINLIQMLAT QPGKPPHLRL TGVDDPESVH RPVGGLKHIG QRLEQLAKAL RVPFEFQAIA  360
SNTSDVTPSM LASCHGEAVI VNFAFLLHHM PDESVSTVNL RDKLLRMVKN LNPKLVTVVE  420
QDMNTNTTPF FSRFVETYNY FAAVYDTLDA TLPRDSQDRI NVERQCLAKD IVNIIACEGE  480
DRVERYEVAG KWRARMTMAG FSSCTMSQNV TDPIRKLIGE YCERLKMYEE MGTVHFGWEE  540
KSLIITSTWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein