PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023536272.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 550aa MW: 61436.3 Da PI: 4.6848 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 420.6 | 1.3e-128 | 181 | 550 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 +e LlecA a+s++++ +a+a++++l+ ++s +gdp qR+aay++e+Laarl+ s++ lykal+++e + ss++laa+++++ev+P++kf+++ XP_023536272.1 181 REMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFM 272 578*****************************************************************9...9********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 +aN aI ea++ e+r+HiiDfd+sqG+Q+++L+q La++p++pp+lR+Tgv++pes+ l+++g+rL+++A++l+vpfef++ +a++++d+ XP_023536272.1 273 AANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVhrPVGGLKHIGQRLEQLAKALRVPFEFQA-IASNTSDV 366 *******************************************************9988999************************.7******* PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 ++++L+ +gEa++Vn+++ lh+++desvs+ + rd++L++vk+l+Pk+v+vveq++++n+++F+ rf+e+ +y++a++d+l+a+lpr+s++ri+ XP_023536272.1 367 TPSMLASCHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRDSQDRIN 461 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 vEr++l+++ivn++aceg++r+er e ++kWr+r+++aGF++ ++s+++++ ++ l+ ++ ++ ++ ee g++ +gW++++L+ +S Wr XP_023536272.1 462 VERQCLAKDIVNIIACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCER-LKMYEEMGTVHFGWEEKSLIITSTWR 550 *************************************************************66.9************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 550 aa Download sequence |
MSLVRPSDLS PLSYGSRKLY SLNGTKNAPD LSAQRFGSEK HRSESYEKYF LDFPIEELSI 60 SGVSGISTNS FHPNAASYGR TDSDSACLES TSPEQLDFED DQVRLKLQEL ERDLLGEPDA 120 ADYDVEMLAN GQAMEIDSEW ANSIKDALLH DSPNESSSTD SNFSTTGSNK DASQMSSQNP 180 REMLLECAFA ISEDNFDEAS AMIEQLRGMV SVQGDPSQRI AAYMVEGLAA RLLASGKCLY 240 KALRCKEPPS SDRLAAMQIL FEVCPCFKFG FMAANCAIIE AAKDEKRIHI IDFDVSQGTQ 300 YINLIQMLAT QPGKPPHLRL TGVDDPESVH RPVGGLKHIG QRLEQLAKAL RVPFEFQAIA 360 SNTSDVTPSM LASCHGEAVI VNFAFLLHHM PDESVSTVNL RDKLLRMVKN LNPKLVTVVE 420 QDMNTNTTPF FSRFVETYNY FAAVYDTLDA TLPRDSQDRI NVERQCLAKD IVNIIACEGE 480 DRVERYEVAG KWRARMTMAG FSSCTMSQNV TDPIRKLIGE YCERLKMYEE MGTVHFGWEE 540 KSLIITSTWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21450.1 | 0.0 | GRAS family protein |