PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536267.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family E2F/DP
Protein Properties Length: 347aa    MW: 38268.8 Da    PI: 5.1527
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.69.2e-2895175271
         E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse..............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e              d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  XP_023536267.1  95 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgnslatpdqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 175
                     689********...*****999*****************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MGTRTQQPCH DDDDDDLPGG PGPAATTISG QSVSMSGSVG SPSNRSEQTM ATPASDNTFL  60
RLNNLDIHGD EAGSQPPTAN VKKKRGQRAV GGDKSGRGLR QFSMKVCEKV ESKGRTTYNE  120
VADELVAEFA DPGNSLATPD QYDEKNIRRR VYDALNVLMA MDIISKDKKE IQWKGLPRTS  180
LNDIEELKAE RLGLRNRIEK KAAYLQELEE QYVGLQNLIQ RNEQLFSSEN APSGGVSLPF  240
ILVQTRPHAT VEIEISEDMQ LVHFDFNSTP FELHDDNYVL KAMKFCDRPQ CDNTAQNFAP  300
DAGEGSSMSG MYQPPQIPLP SMSNTPVRTP TSPPLPGIIK ARVKHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-147E2F/DP family protein