PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536263.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 349aa MW: 38525 Da PI: 5.1527

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536263.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	87.3	1.1e-27	95	177	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg XP_023536263.1 95 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgnslatpdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 177 689******...*999***************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MGTRTQQPCH DDDDDDLPGG PGPAATTISG QSVSMSGSVG SPSNRSEQTM ATPASDNTFL 60 RLNNLDIHGD EAGSQPPTAN VKKKRGQRAV GGDKSGRGLR QFSMKVCEKV ESKGRTTYNE 120 VADELVAEFA DPGNSLATPD QQQYDEKNIR RRVYDALNVL MAMDIISKDK KEIQWKGLPR 180 TSLNDIEELK AERLGLRNRI EKKAAYLQEL EEQYVGLQNL IQRNEQLFSS ENAPSGGVSL 240 PFILVQTRPH ATVEIEISED MQLVHFDFNS TPFELHDDNY VLKAMKFCDR PQCDNTAQNF 300 APDAGEGSSM SGMYQPPQIP LPSMSNTPVR TPTSPPLPGI IKARVKHEH

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MGTRTQQPCH DDDDDDLPGG PGPAATTISG QSVSMSGSVG SPSNRSEQTM ATPASDNTFL  60
RLNNLDIHGD EAGSQPPTAN VKKKRGQRAV GGDKSGRGLR QFSMKVCEKV ESKGRTTYNE  120
VADELVAEFA DPGNSLATPD QQQYDEKNIR RRVYDALNVL MAMDIISKDK KEIQWKGLPR  180
TSLNDIEELK AERLGLRNRI EKKAAYLQEL EEQYVGLQNL IQRNEQLFSS ENAPSGGVSL  240
PFILVQTRPH ATVEIEISED MQLVHFDFNS TPFELHDDNY VLKAMKFCDR PQCDNTAQNF  300
APDAGEGSSM SGMYQPPQIP LPSMSNTPVR TPTSPPLPGI IKARVKHEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-150	E2F/DP family protein