PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023535796.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 333aa    MW: 37203.5 Da    PI: 7.8772
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023535796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00043220242123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +Cg  F++   L  H+r+H
  XP_023535796.1 220 HECAICGAEFTSGQALGGHMRRH 242
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEVDHQQAIM GSKEQALIAK GKRTKRQRLH SPIPFAVPAN SSSGEGGFVV DDSNSVAENN  60
DYEVLIQNQN NFSTSSSSGG ELQPYNIVTE EEEDMANCLI LLAQGRPFCS PPKHVDARPV  120
HHLNNVRRFP TENVAVGTEK GGSGWNGYEC KTCYRTFPSF QALGGHRASH KKPKAMEAEK  180
KLHLSSDYEE MQFRNNITNS LSLQLNQRGS LYSSGKAKVH ECAICGAEFT SGQALGGHMR  240
RHRAMPVGTN TALSLTPMAI ETEDQRQPKR QRSVLSLDLD LNLPAPQEHD QRESFLIKSN  300
QQPQQQHNKQ QQQQQQQQQP LVFSARTLVD CHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.12e-63C2H2 family protein