PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023535521.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 178aa MW: 19697.9 Da PI: 6.2416 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 15 | 66 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k +g+Wv+eIr+p gk++r++lg+f t+e+Aa+a++aa+ ++g+ XP_023535521.1 15 SSYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDAAAYHFRGH 66 67*****999.**********8...557***********************99996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MGDPSSTGSH GASTSSYRGV RKRKWGKWVS EIREPGKKTR IWLGSFETPE MAAAAYDAAA 60 YHFRGHDARL NFPHLANSLP FPNGSTPDDI RFAAHRAALR VRTTPGVGVE GDRGSTSSVA 120 PVTVRLSPSQ IQAINESPLD SPKMWMEMSS EFSNGTVFVD EMEDEMWENM HNDSLWDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 4e-56 | ERF family protein |