PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023535383.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HB-other | ||||||||
Protein Properties | Length: 352aa MW: 40249.1 Da PI: 4.509 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.4 | 1.2e-08 | 286 | 332 | 6 | 52 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 +++k q+ +Le+++++++ p+ +++ + + ++L+ +++ WF +R XP_023535383.1 286 RLKKVQVGTLERVYRRTKRPTNAMISSIVQVTNLPRKRIVKWFEDKR 332 57889**************************************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MQLMALSAPV KAPEALLGSP SISGRVSFFF RRQFPSNFSL LHRPPVRHTL SLTLARRRNQ 60 NSSVGPSSSS SKKKKRNSFP KKTRDEADEE EDALELLFSQ LEEDLKNDKL TLDDDDDDDD 120 GEEDELSEED LAKLERELGL ALGIDIDDEE EEEEEENEEE AEEEAEEDLV DTEEEEMPVK 180 LKNWQLRRLA MALKKGRRKT SIKSLAAELC LDRAVVLDLL REPPPRLLML SASLPDPPTR 240 SIPETRTLQA TREEEEEEEE PVEVVTAEEV KVPVHVMQQS WAAQKRLKKV QVGTLERVYR 300 RTKRPTNAMI SSIVQVTNLP RKRIVKWFED KRGEDGVPDQ RLPYDRSAPK SA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 56 | 76 | RRRNQNSSVGPSSSSSKKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11270.1 | 1e-53 | HB-other family protein |