PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023535287.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 476aa MW: 53200.9 Da PI: 6.4172

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023535287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23.2	1.8e-07	227	248	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 Cp+Cgk F+r nL+ H+r H XP_023535287.1 227 FCPICGKGFKRDANLRMHMRGH 248 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MNWNRESKWA DPSILDYAME QPFQEFEERI ESKASLTCSS NQRIEILDKD SNELNAGLLA 60 SKIQDWDPRA MLNNLSFLEQ KIHQLQELVH LIVGRRNHDE LVVQQQQLIT ADLTSIIVQL 120 ISTAGSLLPS VKHKLSAAVP SVGQLEQLDR VLFASGPRIN SGDGTKLPEL PTQVEESSKC 180 GKEQNMAVEE HESKDEEDAD EHENLPPGSY EILQLEKEEI LAPHTHFCPI CGKGFKRDAN 240 LRMHMRGHGD EYKTAAALAK PNKEPSSETM LIKRYSCPFT GCKRNKDHKK FQPLKTILCV 300 KNHYKRTHCD KSFTCSKCNS KKFSVIADLK THEKHCGKDK WLCSCGTTFS RKDKLFGHIA 360 LFQGHTPAIP LDESKGAAMS FDRGERSDKF RSINFSFGSI ATGGSSVETI ADAKGGVDDP 420 LGCFSPLNFD SCNFEGFHEF PRPPFENVDN VFSFLSPGSG NYTEKSGAES SSNNLE

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MNWNRESKWA DPSILDYAME QPFQEFEERI ESKASLTCSS NQRIEILDKD SNELNAGLLA  60
SKIQDWDPRA MLNNLSFLEQ KIHQLQELVH LIVGRRNHDE LVVQQQQLIT ADLTSIIVQL  120
ISTAGSLLPS VKHKLSAAVP SVGQLEQLDR VLFASGPRIN SGDGTKLPEL PTQVEESSKC  180
GKEQNMAVEE HESKDEEDAD EHENLPPGSY EILQLEKEEI LAPHTHFCPI CGKGFKRDAN  240
LRMHMRGHGD EYKTAAALAK PNKEPSSETM LIKRYSCPFT GCKRNKDHKK FQPLKTILCV  300
KNHYKRTHCD KSFTCSKCNS KKFSVIADLK THEKHCGKDK WLCSCGTTFS RKDKLFGHIA  360
LFQGHTPAIP LDESKGAAMS FDRGERSDKF RSINFSFGSI ATGGSSVETI ADAKGGVDDP  420
LGCFSPLNFD SCNFEGFHEF PRPPFENVDN VFSFLSPGSG NYTEKSGAES SSNNLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein