PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023535286.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 498aa MW: 55418.3 Da PI: 6.2354

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023535286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23.1	1.9e-07	249	270	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 Cp+Cgk F+r nL+ H+r H XP_023535286.1 249 FCPICGKGFKRDANLRMHMRGH 270 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MEPGDSLCSS EVWAKSSSFP NINVQQPSQK WADPSILDYA MEQPFQEFEE RIESKASLTC 60 SSNQRIEILD KDSNELNAGL LASKIQDWDP RAMLNNLSFL EQKIHQLQEL VHLIVGRRNH 120 DELVVQQQQL ITADLTSIIV QLISTAGSLL PSVKHKLSAA VPSVGQLEQL DRVLFASGPR 180 INSGDGTKLP ELPTQVEESS KCGKEQNMAV EEHESKDEED ADEHENLPPG SYEILQLEKE 240 EILAPHTHFC PICGKGFKRD ANLRMHMRGH GDEYKTAAAL AKPNKEPSSE TMLIKRYSCP 300 FTGCKRNKDH KKFQPLKTIL CVKNHYKRTH CDKSFTCSKC NSKKFSVIAD LKTHEKHCGK 360 DKWLCSCGTT FSRKDKLFGH IALFQGHTPA IPLDESKGAA MSFDRGERSD KFRSINFSFG 420 SIATGGSSVE TIADAKGGVD DPLGCFSPLN FDSCNFEGFH EFPRPPFENV DNVFSFLSPG 480 SGNYTEKSGA ESSSNNLE

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MEPGDSLCSS EVWAKSSSFP NINVQQPSQK WADPSILDYA MEQPFQEFEE RIESKASLTC  60
SSNQRIEILD KDSNELNAGL LASKIQDWDP RAMLNNLSFL EQKIHQLQEL VHLIVGRRNH  120
DELVVQQQQL ITADLTSIIV QLISTAGSLL PSVKHKLSAA VPSVGQLEQL DRVLFASGPR  180
INSGDGTKLP ELPTQVEESS KCGKEQNMAV EEHESKDEED ADEHENLPPG SYEILQLEKE  240
EILAPHTHFC PICGKGFKRD ANLRMHMRGH GDEYKTAAAL AKPNKEPSSE TMLIKRYSCP  300
FTGCKRNKDH KKFQPLKTIL CVKNHYKRTH CDKSFTCSKC NSKKFSVIAD LKTHEKHCGK  360
DKWLCSCGTT FSRKDKLFGH IALFQGHTPA IPLDESKGAA MSFDRGERSD KFRSINFSFG  420
SIATGGSSVE TIADAKGGVD DPLGCFSPLN FDSCNFEGFH EFPRPPFENV DNVFSFLSPG  480
SGNYTEKSGA ESSSNNLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein