PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023535261.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Trihelix

Protein Properties

Length: 290aa MW: 32795.4 Da PI: 4.2106

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023535261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.7	2e-10	25	92	1	68
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 +Wt e l+L+++ +e + ++ + ++W+ v++ + + + r+++qC++kwe l + ik++e XP_023535261.1 25 EWTAAECLVLVNVIGAVEADCLKALSSYQKWKIVAEDCTALNVARTSNQCRKKWECLLIEQDVIKQWE 92 5******************************************************8866655555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MKKENGNCGS GVSGSRRTRS QIAPEWTAAE CLVLVNVIGA VEADCLKALS SYQKWKIVAE 60 DCTALNVART SNQCRKKWEC LLIEQDVIKQ WELTMPEDDS YWCLESGRRK ELGLPDYFDE 120 ELFKAIDNVS SMRANQSDTE PDNDPEAAVE NADEISEPGP KRQRRGSMSK RNQGLEKSLE 180 CKEDEEDEAE EQPLLSSPES DLRDCYIKNN GAKATDDIEP EEQMMVKKLL ENAENVQEIV 240 SENAECATSD EKNDKDQTNL IRRQGSKLIR CLGDFLNTIN DLRDLLEDCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	1e-45	Trihelix family protein