PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023535210.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 341aa    MW: 36703.8 Da    PI: 10.1007
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023535210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.12.9e-31264322259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D+++WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp +++itYegeH+h+
  XP_023535210.1 264 TDEFSWRKYGQKPIKGSPYPRAYYKCSTMrGCPARKHVERNPKDPAMLIITYEGEHRHT 322
                     69************************9877****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MAVDLVSFPK IDDQMVIQEA ASQGLKSMEH LIRLLSHKKT SNHGDCSDLT DATVLKLKKA  60
ISLLNRTGHA RFRRGPVSFA FSSPISGSFP HLSVPQDQTM NLAPSLFTSS VTISAPPQAN  120
VVSAAANLPQ SQPQSLTLDF TRPNILNPNP KGTDEFSKET FSVSSSSSLK SSAITGDGSV  180
SNGKVGTAVF LAPAPTASGG KLPLSAEACK KKCHEQDHSE DLSGIISGSK SGSCKCHCSK  240
RRKNRMKKTI QIPAISSKIA DIPTDEFSWR KYGQKPIKGS PYPRAYYKCS TMRGCPARKH  300
VERNPKDPAM LIITYEGEHR HTPSSLLENR AAGVSLALDS T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-107WRKY family protein