PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023535167.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 315aa    MW: 35391.9 Da    PI: 6.8839
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023535167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1707.5e-53121391129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deelv++yL kk+ +   +  + + evd++++ePwd+p+++  + kewyfFs+rd+kyatg r+nrat+sgyWkatgkd++v++k
  XP_023535167.1  12 LPPGFRFHPRDEELVCDYLMKKIGSVCDSS-SLLIEVDLNQCEPWDIPREACVGGKEWYFFSQRDRKYATGLRTNRATASGYWKATGKDRPVFHK 105
                     79*********************8887555.8899*************8777799**************************************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      ++lvg++ktLvfy+grapkg+kt+Wvmhe+rle
  XP_023535167.1 106 ANQLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLE 139
                     *******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MENNISMVEA KLPPGFRFHP RDEELVCDYL MKKIGSVCDS SSLLIEVDLN QCEPWDIPRE  60
ACVGGKEWYF FSQRDRKYAT GLRTNRATAS GYWKATGKDR PVFHKANQLV GMRKTLVFYQ  120
GRAPKGRKTE WVMHEFRLEG PLSPLKDPPP REDWVLCRMF CKQKEVPARP STGSSSSYSN  180
VAASSSLPAL MDSYLSFHQN PSSYLNEFEQ VPCFSILSQN QTIPSLSNLI QMEANTGNNI  240
KNFTTMYGGM PNSSTYSSNI DPFACDSSVL KVVLNNITKM ETNGNPFIGQ PSMGEGSSDS  300
YLSEVGDDIS SFWNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.21e-106NAC family protein