PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534898.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 610aa    MW: 66623 Da    PI: 4.5247
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534898.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS355.95.9e-1092386102374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++Ll+cA+  +s +  +a ++L r+ +   ++gdp++R+a+yf eAL++rl+       + +  s +++ ns++ l ++k++++++P+ kf+hl
  XP_023534898.1 238 LKVLLDCARLCDS-EPDRAVKTLDRIGKSLLEQGDPIERVAFYFGEALRNRLSP---AARNNFLDSIETDANSEDFLLSYKALNDACPYSKFAHL 328
                     679******8877.7889999********************************9...33333434444457799********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+++++++Hi+Df+i qG+QW+aLlqaL++R+ g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +e+
  XP_023534898.1 329 TANQAILEATQRASKIHIVDFGIVQGVQWAALLQALTTRATGKPiKVRISGIPAPSLGesPAASLYATGNRLSEFAKLLELNFEFEP-ILTPIEN 422
                     ****************************************88887**********99998999************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ ++++++++E+laVn++lql+ llde        ++ L+l kslsPk+v++ e ea++n++ F +rf +al+yysa+f+sle +lpr+s er 
  XP_023534898.1 423 LNKSSFSIQSDEVLAVNFMLQLYGLLDEVPVGV---HNALRLAKSLSPKIVTLGEYEASLNRTGFYNRFKNALKYYSAIFESLEPNLPRDSPERL 514
                     **************************6644444...48********************************************************* PP

            GRAS 284 kvErellgreivnvvace...gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                      +E+ l+gr+i  v+ +e   g++rr r+e +e+W++ +e++GF+pv+ls++a +qak ll +++ +  y++ e+  +++ l W+d pL++vS+W
  XP_023534898.1 515 QLEKLLIGRRIAGVIGTEeesGSKRRVRMEDKEEWKNLMESSGFEPVALSHYAISQAKILLWNYNyNSLYSLIESAPEFLsLAWNDVPLLTVSSW 609
                     ***************988223456*****************************************9999***999999999************** PP

            GRAS 374 r 374
                     r
  XP_023534898.1 610 R 610
                     8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    
MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ QQQQQLCPLT PFSLLPWTTT NSSPTMASSS  60
SSSPNLSFGV SGSAFADPFQ VAGDADSAEP AFHFPNLEHP SAGFRFFPNF GGGEFDSDDW  120
MDSLVGGGDS TDSSTLPSGC DAYAEYGLFG VDLFNGSPSR LVVACSPPSD FNRAVLPESS  180
CNTSTVPPPP WSSPPPSVKD AGVANPPAEK LQTNDVVEAS SSAPEEVLPL PSPPPPLLKV  240
LLDCARLCDS EPDRAVKTLD RIGKSLLEQG DPIERVAFYF GEALRNRLSP AARNNFLDSI  300
ETDANSEDFL LSYKALNDAC PYSKFAHLTA NQAILEATQR ASKIHIVDFG IVQGVQWAAL  360
LQALTTRATG KPIKVRISGI PAPSLGESPA ASLYATGNRL SEFAKLLELN FEFEPILTPI  420
ENLNKSSFSI QSDEVLAVNF MLQLYGLLDE VPVGVHNALR LAKSLSPKIV TLGEYEASLN  480
RTGFYNRFKN ALKYYSAIFE SLEPNLPRDS PERLQLEKLL IGRRIAGVIG TEEESGSKRR  540
VRMEDKEEWK NLMESSGFEP VALSHYAISQ AKILLWNYNY NSLYSLIESA PEFLSLAWND  600
VPLLTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein