PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534752.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 447aa MW: 49295.4 Da PI: 8.5686

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.2e-32	173	230	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgse+prsYY+Ct+++Cpv+k+ve+s +++++ei+Y+++Hnh+k XP_023534752.1 173 DDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL-NGQITEIVYKSKHNHPK 230 8**************************************.*************85 PP
2	WRKY	101.1	6.4e-32	325	383	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy WrKYGqK+vkg+++prsYY+Ct+agC v+k++er+++d k+v++tYeg+Hnhe XP_023534752.1 325 LDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVITTYEGKHNHE 383 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MVMEFFFSSR VEEDPTDGRP RLPESTAPPI SSKFSSTPNP NPPLLSAMSQ PLFSPSSFFT 60 IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTGHHQKNM KQEQHNLAEF SFPRTNPTKS 120 SSSSSIMFQS SSMQQNPPWV SQAAFNFPPE TTVNGGSKSD QHPQSQPKNR TSDDGYNWRK 180 YGQKLVKGSE NPRSYYKCTH PTCPVRKQVE KSLNGQITEI VYKSKHNHPK PEFPRRSSSA 240 SSSSSSWLSQ ALPQTMAAEP KHSMASDSIP TPENSSTTIG DDDSDELDAK RWKSESENEI 300 ISVAGGKTVR EQRVVVQTIS RVDKLDDGYW WRKYGQKVVK GNPNPRSYYK CTYAGCGVRK 360 HIERASHDLK AVITTYEGKH NHEIPAARGG GSRPVSNNHG NDNGHASNGA GDVWPSSEIS 420 GGDDGFSNML WRTKEEAADE IFRSLLD

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MVMEFFFSSR VEEDPTDGRP RLPESTAPPI SSKFSSTPNP NPPLLSAMSQ PLFSPSSFFT  60
IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTGHHQKNM KQEQHNLAEF SFPRTNPTKS  120
SSSSSIMFQS SSMQQNPPWV SQAAFNFPPE TTVNGGSKSD QHPQSQPKNR TSDDGYNWRK  180
YGQKLVKGSE NPRSYYKCTH PTCPVRKQVE KSLNGQITEI VYKSKHNHPK PEFPRRSSSA  240
SSSSSSWLSQ ALPQTMAAEP KHSMASDSIP TPENSSTTIG DDDSDELDAK RWKSESENEI  300
ISVAGGKTVR EQRVVVQTIS RVDKLDDGYW WRKYGQKVVK GNPNPRSYYK CTYAGCGVRK  360
HIERASHDLK AVITTYEGKH NHEIPAARGG GSRPVSNNHG NDNGHASNGA GDVWPSSEIS  420
GGDDGFSNML WRTKEEAADE IFRSLLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	2e-86	WRKY family protein