PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534594.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 391aa MW: 43803.3 Da PI: 9.2207

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534594.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.4e-32	247	302	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQk+Rl+ XP_023534594.1 247 KQRRCWSPELHRRFVSALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKFRLH 302 79****************************************************97 PP
2	Myb_DNA-binding	43.4	7.7e-14	249	300	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a +qlGg t+k I + m+ g+t ++ks++qk++ XP_023534594.1 249 RRCWSPELHRRFVSALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKFR 300 568***************99**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MGSLSPELSL DFRSTFVPKS ISDFFKQVSM IDNVSDRVIK LNDFVKSLED EMRKIDAFKR 60 ELPLCMILLK DAILAVKEEE SMQCSVSRTQ PVLEEFKSLK KEFDEQDFRN GKNYRDQKNW 120 MRSVQLWNSD DSKRDSKFET KINEKGGPVV TQVSLQFCRN KNSERSQVPL KAYSVFPSAM 180 AVRKEDKEEF PIHGLSLCTP GIKNPIEESA SSGSRSSGTR AVSSSAMTAP VSLQTGTQQQ 240 QQQLSRKQRR CWSPELHRRF VSALQQLGGS QVATPKQIRE LMQVDGLTND EVKSHLQKFR 300 LHTRRLPAST VTPTNQSIVV LGGLLVAEDQ FRESSKACSS QSGSPQGPLQ LGRTGGTSTT 360 GGDSTEDDDN DVKSESYSWK SRSKRTGKED A

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MGSLSPELSL DFRSTFVPKS ISDFFKQVSM IDNVSDRVIK LNDFVKSLED EMRKIDAFKR  60
ELPLCMILLK DAILAVKEEE SMQCSVSRTQ PVLEEFKSLK KEFDEQDFRN GKNYRDQKNW  120
MRSVQLWNSD DSKRDSKFET KINEKGGPVV TQVSLQFCRN KNSERSQVPL KAYSVFPSAM  180
AVRKEDKEEF PIHGLSLCTP GIKNPIEESA SSGSRSSGTR AVSSSAMTAP VSLQTGTQQQ  240
QQQLSRKQRR CWSPELHRRF VSALQQLGGS QVATPKQIRE LMQVDGLTND EVKSHLQKFR  300
LHTRRLPAST VTPTNQSIVV LGGLLVAEDQ FRESSKACSS QSGSPQGPLQ LGRTGGTSTT  360
GGDSTEDDDN DVKSESYSWK SRSKRTGKED A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	1e-46	G2-like family protein