PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534593.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 392aa MW: 43874.3 Da PI: 9.2207

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.1	2.6e-30	247	303	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGse.kAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs+ +AtPk+i+elm+v+gLt+++vkSHLQk+Rl+ XP_023534593.1 247 KQRRCWSPELHRRFVSALQQLGGSQaVATPKQIRELMQVDGLTNDEVKSHLQKFRLH 303 79*******************8647**************************97 PP
2	Myb_DNA-binding	43.3	8.6e-14	249	301	1	48
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a +qlGg t+k I + m+ g+t ++ks++qk++ XP_023534593.1 249 RRCWSPELHRRFVSALQQLGGSqavaTPKQIRELMQvDGLTNDEVKSHLQKFR 301 568***************99***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MGSLSPELSL DFRSTFVPKS ISDFFKQVSM IDNVSDRVIK LNDFVKSLED EMRKIDAFKR 60 ELPLCMILLK DAILAVKEEE SMQCSVSRTQ PVLEEFKSLK KEFDEQDFRN GKNYRDQKNW 120 MRSVQLWNSD DSKRDSKFET KINEKGGPVV TQVSLQFCRN KNSERSQVPL KAYSVFPSAM 180 AVRKEDKEEF PIHGLSLCTP GIKNPIEESA SSGSRSSGTR AVSSSAMTAP VSLQTGTQQQ 240 QQQLSRKQRR CWSPELHRRF VSALQQLGGS QAVATPKQIR ELMQVDGLTN DEVKSHLQKF 300 RLHTRRLPAS TVTPTNQSIV VLGGLLVAED QFRESSKACS SQSGSPQGPL QLGRTGGTST 360 TGGDSTEDDD NDVKSESYSW KSRSKRTGKE DA

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MGSLSPELSL DFRSTFVPKS ISDFFKQVSM IDNVSDRVIK LNDFVKSLED EMRKIDAFKR  60
ELPLCMILLK DAILAVKEEE SMQCSVSRTQ PVLEEFKSLK KEFDEQDFRN GKNYRDQKNW  120
MRSVQLWNSD DSKRDSKFET KINEKGGPVV TQVSLQFCRN KNSERSQVPL KAYSVFPSAM  180
AVRKEDKEEF PIHGLSLCTP GIKNPIEESA SSGSRSSGTR AVSSSAMTAP VSLQTGTQQQ  240
QQQLSRKQRR CWSPELHRRF VSALQQLGGS QAVATPKQIR ELMQVDGLTN DEVKSHLQKF  300
RLHTRRLPAS TVTPTNQSIV VLGGLLVAED QFRESSKACS SQSGSPQGPL QLGRTGGTST  360
TGGDSTEDDD NDVKSESYSW KSRSKRTGKE DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	8e-45	G2-like family protein