PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Dof | ||||||||
Protein Properties | Length: 265aa MW: 28467.8 Da PI: 8.556 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.3 | 1.9e-39 | 40 | 100 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ke+al+cprC+s+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rknk+ s XP_023534480.1 40 KEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPS 100 7899******************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MDTAQWPQEI VLKPNEEIVG NTCPKPSGVS VVERKIRAQK EQALNCPRCN SSNTKFCYYN 60 NYSLTQPRYF CKTCRRYWTE GGSLRNIPVG GGSRKNKRPS SSSSTTTTTS SNSSSSSTLS 120 TSPTCSNLPP KNPLHLPQTP KTTPSQDLNL SFPSSNQLSA MELLTGMATN SKALNCFIPM 180 PSIVPDPASV YASGFPHLHD QFKPSLGFSL DGYGVVPGEA SNGGGGRVMQ LPFEDLKQGA 240 NGVEEGKEHG DSSGYWSGML GGGSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 6e-55 | Dof family protein |