PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534472.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 299aa    MW: 33046.2 Da    PI: 7.0282
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95e-18105155256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr++  +g+WvAeIr p +   r r++lg+++++e Aa a++ a+ kl+ge
  XP_023534472.1 105 VYRGVRQRQ-WGKWVAEIRLPQN---RMRVWLGTYDSPETAAYAYDCAACKLRGE 155
                     7*****999.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
METMTNRGTL QFTDVSTALS NLILTAGGNT LDSIFSHCDN FSFSVIDGVD FEPAVGSSVY  60
LRQREVLQRF SQERKANGSR DLFTKAYELL YSGCGAAVDG GKRKVYRGVR QRQWGKWVAE  120
IRLPQNRMRV WLGTYDSPET AAYAYDCAAC KLRGEYARLN FPNLKDLKSD LGSDEFVKLS  180
GLKKLVDAKI QAIFQKIKGK GKKKDCRRIG GDLGSGSCSS SSSSVSLPPA VVEMTEEWSW  240
ERVSPIGAAE DGLWNFENSP RAGSVDCLTA TATGSETEWY SLEKMPSFDA EQIWDVLAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.13e-42ERF family protein