PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 270aa MW: 30424.2 Da PI: 9.4187 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 105.2 | 8.3e-33 | 40 | 182 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 lp+G++F+Ptd+el+ +L+ kv + ++l+ +i+ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+ XP_023534350.1 40 LPAGVKFDPTDQELL-LHLEGKVGCDAHKLHPlidefipTIQWEhGICYTHPQKLP-GVRKDGLVRHFFHRPSKAYTTGTRKRRKvhadntegEG 132 799************.88****999884442233333333443347**********.566666788******************85666654433 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++vl+ g+++g kk+Lv+y g+++k+ekt+W+mh+y+l XP_023534350.1 133 ETRWHKTGKTRPVLV-AGRVKGYKKILVLYtnYGKQKKPEKTNWIMHQYHL 182 778************.999***********6658999************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MTQFVDKYVT NSSSSCPSCG HHQIKSPEKG GAGIHILPGL PAGVKFDPTD QELLLHLEGK 60 VGCDAHKLHP LIDEFIPTIQ WEHGICYTHP QKLPGVRKDG LVRHFFHRPS KAYTTGTRKR 120 RKVHADNTEG EGETRWHKTG KTRPVLVAGR VKGYKKILVL YTNYGKQKKP EKTNWIMHQY 180 HLGASEEEKD GELVVSKVFY QTQPRQCGNS VKKDHNRHED SSSSNNNPNP LVDFYNPSFV 240 YFESSDQNRS ASNSHMIPQF AVHDGSSAVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 1e-113 | NAC family protein |