PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534238.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 315aa    MW: 36103.9 Da    PI: 7.2389
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.51.4e-35151052101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+ye+++d+ +++++sws++g sfvv+++ efak++Lp yFkh+nf+SFvRQLn+YgF+kv++++         weF+++ F +g+++ll++
  XP_023534238.1  15 FLTKTYEMVDDPMTNSVVSWSKSGYSFVVWNPPEFAKELLPVYFKHNNFSSFVRQLNTYGFRKVDRDQ---------WEFANEGFIRGRTHLLKS 100
                     9****************************************************************998.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_023534238.1 101 IHRRK 105
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEGSDGSYGG APPPFLTKTY EMVDDPMTNS VVSWSKSGYS FVVWNPPEFA KELLPVYFKH  60
NNFSSFVRQL NTYGFRKVDR DQWEFANEGF IRGRTHLLKS IHRRKPIFSH SQSQSQSQSH  120
GSGAPLSELE RQELELKIKT LHQEKTILQT QLQEHEHEKE QIGRQIQTMC QQIWRMGNQQ  180
KQLIAIMAAE LQKDQSRKRR KIGKLSEFLG EEWLEVERDE RNGLKNGLKV PALELMGKLE  240
VSLGLCEDLL CNVAEVLGGE MSGKRKEMEG KGVKEGEKRG ENGVNDVFWE QFLTEVPGCS  300
NGGEVYLDRR SNVLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.12e-57HSF family protein