PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534187.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | E2F/DP | ||||||||
Protein Properties | Length: 462aa MW: 51176.8 Da PI: 4.4122 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 87 | 1.4e-27 | 140 | 205 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_023534187.1 140 RYDSSLGLLTKKFINLIKQAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 205 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence |
MSGSPAPNSS GHPPEQIMLS LKRHLPFSSI KPPFASPGDY HRFALDSPLV DQQLDSIVVK 60 SPQLKRKSEA ADYEAESTDR AAGPRFTEVV NSSHQTPVSV KGGKGNKSRL TKCSRSGPQT 120 PMSNVGSPYA NNLTPVGPCR YDSSLGLLTK KFINLIKQAE DGILDLNKAA DTLEVQKRRI 180 YDITNVLEGI GLIEKKLKNR IQWKGLDVSR SGDVDDNYAG LQAEVENLSM EENGLDEQIR 240 EMQERLRDLS EEENNQRWLF VTEEDIKELP CFQNETLIAI KAPHGTTLEV PDPDEAVDYP 300 QRRYRIVLRS TMGPIDVYLV SQFEEKFEEI NGVEVSPSLP SSSGFNETPA ATLVTDDTRG 360 KEVETREQDV NRMCSDLNAS QDFVGGIMKI VPSAVDSDAD YWLLSDADVS ITDMWRTEPG 420 VEWNELSTFH EDYSIDNVST PQAQNPPSNN SPDAPSANPS SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.2 | 1e-155 | E2F/DP family protein |