PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023534186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 466aa MW: 51654.4 Da PI: 4.4412 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 87 | 1.4e-27 | 140 | 205 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_023534186.1 140 RYDSSLGLLTKKFINLIKQAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 205 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 466 aa Download sequence |
MSGSPAPNSS GHPPEQIMLS LKRHLPFSSI KPPFASPGDY HRFALDSPLV DQQLDSIVVK 60 SPQLKRKSEA ADYEAESTDR AAGPRFTEVV NSSHQTPVSV KGGKGNKSRL TKCSRSGPQT 120 PMSNVGSPYA NNLTPVGPCR YDSSLGLLTK KFINLIKQAE DGILDLNKAA DTLEVQKRRI 180 YDITNVLEGI GLIEKKLKNR IQWKGLDVSR SGDVDDNYAG LQLHVQAEVE NLSMEENGLD 240 EQIREMQERL RDLSEEENNQ RWLFVTEEDI KELPCFQNET LIAIKAPHGT TLEVPDPDEA 300 VDYPQRRYRI VLRSTMGPID VYLVSQFEEK FEEINGVEVS PSLPSSSGFN ETPAATLVTD 360 DTRGKEVETR EQDVNRMCSD LNASQDFVGG IMKIVPSAVD SDADYWLLSD ADVSITDMWR 420 TEPGVEWNEL STFHEDYSID NVSTPQAQNP PSNNSPDAPS ANPSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G36010.3 | 1e-154 | E2F/DP family protein |