PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26164.5 Da PI: 4.9766 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.5 | 1.7e-18 | 86 | 137 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+++AeIrd + + r++lg+f++ae Aa a+++a+ +++g+ XP_023534089.1 86 NYRGVRRRP-WGKYAAEIRDSTR---QgVRVWLGTFDSAEAAALAYDQAAYSMRGA 137 59*******.**********322...24*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MESYYFSFSD SDFSTECSLG SPEELSFSWS DFFSINSVLE NSLSLPGEFL GHQPSESELK 60 IAVKEEIEVS SIDLEREKER KTTEKNYRGV RRRPWGKYAA EIRDSTRQGV RVWLGTFDSA 120 EAAALAYDQA AYSMRGALAV LNFPVEMVRE SLQEIKYELE EGLSPVVALK RKHSLRRKSG 180 AAAKSQGVAE TKKMKKKKNV VILEDLGTEY LEELLMLSSC ESSSSSCSSM SPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 176 | 198 | RRKSGAAAKSQGVAETKKMKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-43 | ERF family protein |