PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534055.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 602aa MW: 66026.4 Da PI: 6.2113 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 344 | 2.5e-105 | 238 | 602 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 + ++e+A a+s+g+l ++++L+ + ++++ +g+++qRla y++ AL++r++ + +pp ++ +e+ aa++ +++vsP++k+++++ XP_023534055.1 238 QSVIEAAAAISEGKLDVVDEILSPVVKISNARGSSVQRLAEYMVFALKSRVNP------AEFPPPVAE-IFGDEHSAATQSLYDVSPCFKLAFMA 325 6789************************************************9......444444333.46999********************* PP GRAS 98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191 aN aIlea+e+e +++H++Dfdi++G+Q+++L++ L+ R++g+ +++T+v++ e+g+ e+l+++ge L+++A+elgv f+fn+ v ++l++l+ XP_023534055.1 326 ANLAILEAIEEEdRKLHVVDFDIGKGGQYMNLIHLLSGRQKGKVAVKLTAVVA-ENGRDERLKHVGESLSQLAKELGVGFKFNL-VKHELAELTR 418 ************7788*************************************.779**************************9.799******* PP GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286 e+L ++ +E+laVn++++l++++desvs+e++rde+L+ vk P vv+v+eqe+++n+++F++r++e++ yy +lfds+++++ ++ +r+kvE XP_023534055.1 419 ESLGCDADESLAVNFAFKLYQMPDESVSTENPRDELLRRVKAWAPAVVTVMEQELNTNTAPFAARVSESCIYYGSLFDSIDSTMWCDHPDRVKVE 513 *********************************************************************************************** PP GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374 + lgr++ n +aceg+er+er+e +kWr+r+++aGF++ ++se +a+++k+ l+ + + g++v+ee+g +++gW++r+L++++aWr XP_023534055.1 514 EG-LGRKLANSLACEGRERVERCEVSGKWRARMGMAGFESRRMSEMVAESMKTRLSSGYrvNPGFTVKEENGGICFGWMGRTLTVTTAWR 602 **.*************************************************98887655889**************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 602 aa Download sequence |
MQSGFTGGGP PDFYTSGRSM ANPSHPNPYR SQLSGGAFVD PTIPQIARQI PSSLLGKRNL 60 SDLHSLNQYT HHNLPVNNLF LRSVKPRAGF SHPISPLSNF DLYSTMSLPS SEVQTHRLYG 120 SSSAAVLQQL RQQPNSSAVT LRDLQNLESE KKMMMNHRLQ ELEKQLLEDN DDDDGSDAAS 180 VITSSTSAWC ETMYNLISPT APPNQKPVST SPTTSASSSC SSSTSSSVAS PSSDSWKQSV 240 IEAAAAISEG KLDVVDEILS PVVKISNARG SSVQRLAEYM VFALKSRVNP AEFPPPVAEI 300 FGDEHSAATQ SLYDVSPCFK LAFMAANLAI LEAIEEEDRK LHVVDFDIGK GGQYMNLIHL 360 LSGRQKGKVA VKLTAVVAEN GRDERLKHVG ESLSQLAKEL GVGFKFNLVK HELAELTRES 420 LGCDADESLA VNFAFKLYQM PDESVSTENP RDELLRRVKA WAPAVVTVME QELNTNTAPF 480 AARVSESCIY YGSLFDSIDS TMWCDHPDRV KVEEGLGRKL ANSLACEGRE RVERCEVSGK 540 WRARMGMAGF ESRRMSEMVA ESMKTRLSSG YRVNPGFTVK EENGGICFGW MGRTLTVTTA 600 WR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52510.1 | 1e-133 | GRAS family protein |