PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023533866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 220aa MW: 24752.9 Da PI: 10.8882 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 3.9e-16 | 34 | 79 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+q+G+ +W+ Ia+++ R++k+c++rw++ XP_023533866.1 34 RGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFE-ARSGKSCRLRWYNQ 79 899*****************************.************96 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.4e-16 | 86 | 129 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ +++G++ W++Iar++ gRt++ +k++++ XP_023533866.1 86 KNPFTEEEEERLLIFQRLHGNK-WALIARHFK-GRTDNAVKNHYHV 129 689*******************.********9.***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MRMIGSRSSS SSSGGGGGGG GGCGSGSSGV TCYRGHWRPA EDNKLRQLVE QFGPQNWNYI 60 AEHFEARSGK SCRLRWYNQL DPNINKNPFT EEEEERLLIF QRLHGNKWAL IARHFKGRTD 120 NAVKNHYHVI MARRRRERFT IFTNNSNILR SRHCLLPFSN VLQSSHQKMT PKWSPLTAGP 180 TLENGRGKSV AVVASSGSEE MKGEQKRRIP FIDFLGMGSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33450.1 | 7e-61 | MYB family protein |