PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533836.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 360aa MW: 39640.9 Da PI: 8.5007

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_023533836.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.3e-23	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_023533836.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MFHATKKPSS MTSSHDRPMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDQS IKDGMRASAL ELHRNSGSSS 120 TLMDRSMNEM QLEVQRRLHE QIEVQRHLQL RIEAQGKYMQ SILEKACQTL AGENMAAAAA 180 AAGRFKTTSN NIGTTTNLVS DAANKAFISP PPPPHTFPPF QDINNLFTSE PPAPAPPLID 240 CLKKPNPFIS DTGKTPIFWA DDLRLQDLGT PSATLAPPPP PINGSADLDP QQLEMYETKP 300 PPLLLSVGND VMTNEKNFDV SLKLEGPSPR HSSGHSDEKV NNNNNPTMSQ SQGRNNSHLG

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MFHATKKPSS MTSSHDRPMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA  60
TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDQS IKDGMRASAL ELHRNSGSSS  120
TLMDRSMNEM QLEVQRRLHE QIEVQRHLQL RIEAQGKYMQ SILEKACQTL AGENMAAAAA  180
AAGRFKTTSN NIGTTTNLVS DAANKAFISP PPPPHTFPPF QDINNLFTSE PPAPAPPLID  240
CLKKPNPFIS DTGKTPIFWA DDLRLQDLGT PSATLAPPPP PINGSADLDP QQLEMYETKP  300
PPLLLSVGND VMTNEKNFDV SLKLEGPSPR HSSGHSDEKV NNNNNPTMSQ SQGRNNSHLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-107	G2-like family protein