PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533735.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 295aa    MW: 33835.3 Da    PI: 6.1268
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.32.1e-5181321128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelv +yL++k++++++ +  +ike+d+yk++Pw+Lp+ +  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + 
  XP_023533735.1   8 LPPGFRFHPTDEELVLHYLCRKCSSQPIAV-PIIKEIDLYKYDPWHLPELAVCGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGR- 100
                     79**************************99.88***************7666789*************************************98. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +  g+kk Lvfy g+ap+g+kt+W+mheyrl
  XP_023533735.1 101 -PKPLGIKKALVFYAGKAPTGVKTNWIMHEYRL 132
                     .789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MTVAGLELPP GFRFHPTDEE LVLHYLCRKC SSQPIAVPII KEIDLYKYDP WHLPELAVCG  60
EKEWYFFSPR DRKYPNGSRP NRAAGTGYWK ATGADKPIGR PKPLGIKKAL VFYAGKAPTG  120
VKTNWIMHEY RLANVDRSAT KKPHNLRLDD WVLCRIYNKK GCIEKHYQST DDKASEFPDF  180
EEEKPIITMP STTNMLHLPI HNNQLHMDTS DSVPIMHTDD SSGSDPVTSP EVTWDKEVQS  240
EPKWGGGAPD FDFFQFNYMD SFSMTEDDPF GSQVPFQMDH LPPFQDMFSC LQRQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-119NAC family protein