PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533641.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 284aa    MW: 31723.1 Da    PI: 10.0829
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.52.1e-31212270259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ ++p+++++tYegeHnh+
  XP_023533641.1 212 SDEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLQQPSMLIVTYEGEHNHP 270
                     69************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEEVEEANRA AIHTCHGVLN LLAHQSPHLT PLTVETGEAV SKFRKVVSLL NSGFGHARAR  60
RLNNIPSLPL PHNALLDPPI NTTHPPTKTL PPFHPPFNTQ VSIFLGNPDL GLPHNHIQTP  120
KQPPSLSFSF PQQQQKQRML AHHKQTNLNF ENSNCSFTIS SPTSFISSLS MDEGSFQCGT  180
TAKCHCSNKR KHRVKRSIKV PAISNKLADI PSDEYSWRKY GQKPIKGSPH PRGYYKCSSM  240
RGCPARKHVE RCLQQPSMLI VTYEGEHNHP TMSAHTHPTN LLSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.16e-59WRKY family protein