PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533426.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 306aa    MW: 33219.2 Da    PI: 8.5069
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer108.34.2e-3467123459
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                     v+YkeClkNhAa+lG+ha+DGCgEfmps++++ +++++lkCaACgCHRnFHRr++ee
  XP_023533426.1  67 VTYKECLKNHAATLGAHALDGCGEFMPSPSSTpTDPTSLKCAACGCHRNFHRRDPEE 123
                     89*****************************99********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MFREVCVFER AMDLAPAAPI TTTNNTKSPD PDTDNTPTTI PPPSAKSPPF TNGLLKRHHA  60
QQHPPLVTYK ECLKNHAATL GAHALDGCGE FMPSPSSTPT DPTSLKCAAC GCHRNFHRRD  120
PEEPISTLAI NSAPTHVIEY QPHHRHHPPP PPLAGSWSPN SASPPPISSS YYPSAPHMLL  180
ALSAGLSGPP PENAQRSPNG RKRFRTKFSN EQKEKMLDLA ERVGWKMQKR DEDLVRDFCN  240
EIGIERGVLK VWMHNNKNTM GKKTDTNGAT TTTPTATAAA AVNNNENRAD AGLHMHIGSN  300
GSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.15e-60ZF-HD family protein