PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533386.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 428aa MW: 47774 Da PI: 5.9344

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533386.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.6	7.4e-25	193	246	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+p LH +F++aveqL +++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533386.1 193 KTKVDWSPGLHGKFIQAVEQL-CIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 246 6799***************.9*****************************8 PP
2	Myb_DNA-binding	27.8	5.7e-09	196	245	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++ ++ ++++av+ql + +++I + m +g+t+ ++ s++qky+ XP_023533386.1 196 VDWSPGLHGKFIQAVEQLCIDraIPSKILELMKvEGLTRHNVASHLQKYR 245 57**************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MLFYGTVTSD VYCLSTMMKC IALGAVEFLL KPLSEEKLRN IWQHVLHKAF SSTPKAEVDS 60 AATLMQLQLE SEDNNEVLED TEVLSWIQDV VWEKEQPEGS VISQLNQGSS LQGCWESGNQ 120 MNSSMETGCS DKDVQSNFVE TTSHDLVCED TLQEGQPQLS GKNKCGVKSG PSAAEHSIQG 180 SDVNPSAGSK AKKTKVDWSP GLHGKFIQAV EQLCIDRAIP SKILELMKVE GLTRHNVASH 240 LQKYRMQRKH VMHREENPTR YSMQTNHLKP IMAYPSSYPY SGISMATVYP TWTQTNGQPA 300 NVNMWGRPDC RHWLQPGTRP WNSYSGMKAD AWGCPVMLPS PAPYFSYPQQ ISSSHNVYTA 360 NKSYGTPQSS FDLQPDEEVI DEIVNEVMRK PRSALPLGLK PPAEILVEEL PRQVISTLTP 420 QINAFNPP

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MLFYGTVTSD VYCLSTMMKC IALGAVEFLL KPLSEEKLRN IWQHVLHKAF SSTPKAEVDS  60
AATLMQLQLE SEDNNEVLED TEVLSWIQDV VWEKEQPEGS VISQLNQGSS LQGCWESGNQ  120
MNSSMETGCS DKDVQSNFVE TTSHDLVCED TLQEGQPQLS GKNKCGVKSG PSAAEHSIQG  180
SDVNPSAGSK AKKTKVDWSP GLHGKFIQAV EQLCIDRAIP SKILELMKVE GLTRHNVASH  240
LQKYRMQRKH VMHREENPTR YSMQTNHLKP IMAYPSSYPY SGISMATVYP TWTQTNGQPA  300
NVNMWGRPDC RHWLQPGTRP WNSYSGMKAD AWGCPVMLPS PAPYFSYPQQ ISSSHNVYTA  360
NKSYGTPQSS FDLQPDEEVI DEIVNEVMRK PRSALPLGLK PPAEILVEEL PRQVISTLTP  420
QINAFNPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.5	2e-51	ARR-B family protein