PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533378.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 432aa MW: 48283.4 Da PI: 6.322

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533378.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.5	6.3e-28	197	250	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533378.1 197 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 250 6799***************.******************************8 PP
2	Myb_DNA-binding	42.6	1.4e-13	200	249	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533378.1 200 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 249 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MLLGAVEFLL KPLSEDKLKN IWQHVLHKAF SSTPMPEVDS AASLMQLQLE SEDNNGVLGD 60 TEGLSWIQDI VWEQEQPNGS VKSQLNQGSS LQGCWESGDQ MNCPMETDCS DKDVQSNFVE 120 TTSHDLVCED TLQECQPRLS GKVMVKEDEN SAVGLNAESD IYLPLQNKCG VKSGPSAVEH 180 SIQGSDVNPS AGSKSKKTKV DWSPELHRKF IQAVEQLGID RAIPSKILEL MKVEGLTRHN 240 VASHLQKYRM QKKHAVHREE NPRFSMLTNH LKPNMAYPSY YPYCGISMST VYRTWTQNNG 300 QPANVNMWGP PDYRHWPQPG TQPWNSYAGM QADAWGCPVM LPSPAPYFSY PQQISSSHNV 360 YTANKSYGTP HSSFDLQPDE ELIDKIVTEA RRKPWSPLPL GLKRPSPESV LKELSKQGIS 420 TVPPRINGSK PP

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MLLGAVEFLL KPLSEDKLKN IWQHVLHKAF SSTPMPEVDS AASLMQLQLE SEDNNGVLGD  60
TEGLSWIQDI VWEQEQPNGS VKSQLNQGSS LQGCWESGDQ MNCPMETDCS DKDVQSNFVE  120
TTSHDLVCED TLQECQPRLS GKVMVKEDEN SAVGLNAESD IYLPLQNKCG VKSGPSAVEH  180
SIQGSDVNPS AGSKSKKTKV DWSPELHRKF IQAVEQLGID RAIPSKILEL MKVEGLTRHN  240
VASHLQKYRM QKKHAVHREE NPRFSMLTNH LKPNMAYPSY YPYCGISMST VYRTWTQNNG  300
QPANVNMWGP PDYRHWPQPG TQPWNSYAGM QADAWGCPVM LPSPAPYFSY PQQISSSHNV  360
YTANKSYGTP HSSFDLQPDE ELIDKIVTEA RRKPWSPLPL GLKRPSPESV LKELSKQGIS  420
TVPPRINGSK PP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	5e-55	ARR-B family protein