PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533377.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 436aa MW: 48717 Da PI: 6.446

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.5	6.4e-28	201	254	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533377.1 201 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 254 6799***************.******************************8 PP
2	Myb_DNA-binding	42.6	1.4e-13	204	253	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533377.1 204 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 253 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MMKCIALGAV EFLLKPLSED KLKNIWQHVL HKAFSSTPMP EVDSAASLMQ LQLESEDNNG 60 VLGDTEGLSW IQDIVWEQEQ PNGSVKSQLN QGSSLQGCWE SGDQMNCPME TDCSDKDVQS 120 NFVETTSHDL VCEDTLQECQ PRLSGKVMVK EDENSAVGLN AESDIYLPLQ NKCGVKSGPS 180 AVEHSIQGSD VNPSAGSKSK KTKVDWSPEL HRKFIQAVEQ LGIDRAIPSK ILELMKVEGL 240 TRHNVASHLQ KYRMQKKHAV HREENPRFSM LTNHLKPNMA YPSYYPYCGI SMSTVYRTWT 300 QNNGQPANVN MWGPPDYRHW PQPGTQPWNS YAGMQADAWG CPVMLPSPAP YFSYPQQISS 360 SHNVYTANKS YGTPHSSFDL QPDEELIDKI VTEARRKPWS PLPLGLKRPS PESVLKELSK 420 QGISTVPPRI NGSKPP

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MMKCIALGAV EFLLKPLSED KLKNIWQHVL HKAFSSTPMP EVDSAASLMQ LQLESEDNNG  60
VLGDTEGLSW IQDIVWEQEQ PNGSVKSQLN QGSSLQGCWE SGDQMNCPME TDCSDKDVQS  120
NFVETTSHDL VCEDTLQECQ PRLSGKVMVK EDENSAVGLN AESDIYLPLQ NKCGVKSGPS  180
AVEHSIQGSD VNPSAGSKSK KTKVDWSPEL HRKFIQAVEQ LGIDRAIPSK ILELMKVEGL  240
TRHNVASHLQ KYRMQKKHAV HREENPRFSM LTNHLKPNMA YPSYYPYCGI SMSTVYRTWT  300
QNNGQPANVN MWGPPDYRHW PQPGTQPWNS YAGMQADAWG CPVMLPSPAP YFSYPQQISS  360
SHNVYTANKS YGTPHSSFDL QPDEELIDKI VTEARRKPWS PLPLGLKRPS PESVLKELSK  420
QGISTVPPRI NGSKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	5e-59	ARR-B family protein