PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533376.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 450aa MW: 50544 Da PI: 6.607

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.4	6.7e-28	215	268	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533376.1 215 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 268 6799***************.******************************8 PP
2	Myb_DNA-binding	42.5	1.5e-13	218	267	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533376.1 218 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 267 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MLRCGPRSDF RCLLPKHHDE VHCIEFLLKP LSEDKLKNIW QHVLHKAFSS TPMPEVDSAA 60 SLMQLQLESE DNNGVLGDTE GLSWIQDIVW EQEQPNGSVK SQLNQGSSLQ GCWESGDQMN 120 CPMETDCSDK DVQSNFVETT SHDLVCEDTL QECQPRLSGK VMVKEDENSA VGLNAESDIY 180 LPLQNKCGVK SGPSAVEHSI QGSDVNPSAG SKSKKTKVDW SPELHRKFIQ AVEQLGIDRA 240 IPSKILELMK VEGLTRHNVA SHLQKYRMQK KHAVHREENP RFSMLTNHLK PNMAYPSYYP 300 YCGISMSTVY RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ PWNSYAGMQA DAWGCPVMLP 360 SPAPYFSYPQ QISSSHNVYT ANKSYGTPHS SFDLQPDEEL IDKIVTEARR KPWSPLPLGL 420 KRPSPESVLK ELSKQGISTV PPRINGSKPP

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MLRCGPRSDF RCLLPKHHDE VHCIEFLLKP LSEDKLKNIW QHVLHKAFSS TPMPEVDSAA  60
SLMQLQLESE DNNGVLGDTE GLSWIQDIVW EQEQPNGSVK SQLNQGSSLQ GCWESGDQMN  120
CPMETDCSDK DVQSNFVETT SHDLVCEDTL QECQPRLSGK VMVKEDENSA VGLNAESDIY  180
LPLQNKCGVK SGPSAVEHSI QGSDVNPSAG SKSKKTKVDW SPELHRKFIQ AVEQLGIDRA  240
IPSKILELMK VEGLTRHNVA SHLQKYRMQK KHAVHREENP RFSMLTNHLK PNMAYPSYYP  300
YCGISMSTVY RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ PWNSYAGMQA DAWGCPVMLP  360
SPAPYFSYPQ QISSSHNVYT ANKSYGTPHS SFDLQPDEEL IDKIVTEARR KPWSPLPLGL  420
KRPSPESVLK ELSKQGISTV PPRINGSKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	2e-52	ARR-B family protein