PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533374.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 452aa MW: 50851.5 Da PI: 6.8732

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.4	6.7e-28	217	270	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533374.1 217 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 270 6799***************.******************************8 PP
2	Myb_DNA-binding	42.5	1.5e-13	220	269	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533374.1 220 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 269 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MMVERGKRLQ LRRMFVDAAK SCIFHFEFLL KPLSEDKLKN IWQHVLHKAF SSTPMPEVDS 60 AASLMQLQLE SEDNNGVLGD TEGLSWIQDI VWEQEQPNGS VKSQLNQGSS LQGCWESGDQ 120 MNCPMETDCS DKDVQSNFVE TTSHDLVCED TLQECQPRLS GKVMVKEDEN SAVGLNAESD 180 IYLPLQNKCG VKSGPSAVEH SIQGSDVNPS AGSKSKKTKV DWSPELHRKF IQAVEQLGID 240 RAIPSKILEL MKVEGLTRHN VASHLQKYRM QKKHAVHREE NPRFSMLTNH LKPNMAYPSY 300 YPYCGISMST VYRTWTQNNG QPANVNMWGP PDYRHWPQPG TQPWNSYAGM QADAWGCPVM 360 LPSPAPYFSY PQQISSSHNV YTANKSYGTP HSSFDLQPDE ELIDKIVTEA RRKPWSPLPL 420 GLKRPSPESV LKELSKQGIS TVPPRINGSK PP

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MMVERGKRLQ LRRMFVDAAK SCIFHFEFLL KPLSEDKLKN IWQHVLHKAF SSTPMPEVDS  60
AASLMQLQLE SEDNNGVLGD TEGLSWIQDI VWEQEQPNGS VKSQLNQGSS LQGCWESGDQ  120
MNCPMETDCS DKDVQSNFVE TTSHDLVCED TLQECQPRLS GKVMVKEDEN SAVGLNAESD  180
IYLPLQNKCG VKSGPSAVEH SIQGSDVNPS AGSKSKKTKV DWSPELHRKF IQAVEQLGID  240
RAIPSKILEL MKVEGLTRHN VASHLQKYRM QKKHAVHREE NPRFSMLTNH LKPNMAYPSY  300
YPYCGISMST VYRTWTQNNG QPANVNMWGP PDYRHWPQPG TQPWNSYAGM QADAWGCPVM  360
LPSPAPYFSY PQQISSSHNV YTANKSYGTP HSSFDLQPDE ELIDKIVTEA RRKPWSPLPL  420
GLKRPSPESV LKELSKQGIS TVPPRINGSK PP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	5e-52	ARR-B family protein