PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533373.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 469aa MW: 52687.7 Da PI: 6.8733

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.3	7.1e-28	234	287	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533373.1 234 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 287 6799***************.******************************8 PP
2	Myb_DNA-binding	42.4	1.6e-13	237	286	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533373.1 237 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 286 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MMVERGKRLQ LRRMFVDAAK SCIFHFFLIA FYAEVRTAIL GAVEFLLKPL SEDKLKNIWQ 60 HVLHKAFSST PMPEVDSAAS LMQLQLESED NNGVLGDTEG LSWIQDIVWE QEQPNGSVKS 120 QLNQGSSLQG CWESGDQMNC PMETDCSDKD VQSNFVETTS HDLVCEDTLQ ECQPRLSGKV 180 MVKEDENSAV GLNAESDIYL PLQNKCGVKS GPSAVEHSIQ GSDVNPSAGS KSKKTKVDWS 240 PELHRKFIQA VEQLGIDRAI PSKILELMKV EGLTRHNVAS HLQKYRMQKK HAVHREENPR 300 FSMLTNHLKP NMAYPSYYPY CGISMSTVYR TWTQNNGQPA NVNMWGPPDY RHWPQPGTQP 360 WNSYAGMQAD AWGCPVMLPS PAPYFSYPQQ ISSSHNVYTA NKSYGTPHSS FDLQPDEELI 420 DKIVTEARRK PWSPLPLGLK RPSPESVLKE LSKQGISTVP PRINGSKPP

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MMVERGKRLQ LRRMFVDAAK SCIFHFFLIA FYAEVRTAIL GAVEFLLKPL SEDKLKNIWQ  60
HVLHKAFSST PMPEVDSAAS LMQLQLESED NNGVLGDTEG LSWIQDIVWE QEQPNGSVKS  120
QLNQGSSLQG CWESGDQMNC PMETDCSDKD VQSNFVETTS HDLVCEDTLQ ECQPRLSGKV  180
MVKEDENSAV GLNAESDIYL PLQNKCGVKS GPSAVEHSIQ GSDVNPSAGS KSKKTKVDWS  240
PELHRKFIQA VEQLGIDRAI PSKILELMKV EGLTRHNVAS HLQKYRMQKK HAVHREENPR  300
FSMLTNHLKP NMAYPSYYPY CGISMSTVYR TWTQNNGQPA NVNMWGPPDY RHWPQPGTQP  360
WNSYAGMQAD AWGCPVMLPS PAPYFSYPQQ ISSSHNVYTA NKSYGTPHSS FDLQPDEELI  420
DKIVTEARRK PWSPLPLGLK RPSPESVLKE LSKQGISTVP PRINGSKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-55	ARR-B family protein