PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533372.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 470aa MW: 52503.4 Da PI: 6.3216

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.3	7.1e-28	235	288	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533372.1 235 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 288 6799***************.******************************8 PP
2	Myb_DNA-binding	42.4	1.6e-13	238	287	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533372.1 238 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 287 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MLMCKGNYDE SFKLLGSSKD LPIIMTSDVY CLSTMMKCIA LGAVEFLLKP LSEDKLKNIW 60 QHVLHKAFSS TPMPEVDSAA SLMQLQLESE DNNGVLGDTE GLSWIQDIVW EQEQPNGSVK 120 SQLNQGSSLQ GCWESGDQMN CPMETDCSDK DVQSNFVETT SHDLVCEDTL QECQPRLSGK 180 VMVKEDENSA VGLNAESDIY LPLQNKCGVK SGPSAVEHSI QGSDVNPSAG SKSKKTKVDW 240 SPELHRKFIQ AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQK KHAVHREENP 300 RFSMLTNHLK PNMAYPSYYP YCGISMSTVY RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ 360 PWNSYAGMQA DAWGCPVMLP SPAPYFSYPQ QISSSHNVYT ANKSYGTPHS SFDLQPDEEL 420 IDKIVTEARR KPWSPLPLGL KRPSPESVLK ELSKQGISTV PPRINGSKPP

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MLMCKGNYDE SFKLLGSSKD LPIIMTSDVY CLSTMMKCIA LGAVEFLLKP LSEDKLKNIW  60
QHVLHKAFSS TPMPEVDSAA SLMQLQLESE DNNGVLGDTE GLSWIQDIVW EQEQPNGSVK  120
SQLNQGSSLQ GCWESGDQMN CPMETDCSDK DVQSNFVETT SHDLVCEDTL QECQPRLSGK  180
VMVKEDENSA VGLNAESDIY LPLQNKCGVK SGPSAVEHSI QGSDVNPSAG SKSKKTKVDW  240
SPELHRKFIQ AVEQLGIDRA IPSKILELMK VEGLTRHNVA SHLQKYRMQK KHAVHREENP  300
RFSMLTNHLK PNMAYPSYYP YCGISMSTVY RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ  360
PWNSYAGMQA DAWGCPVMLP SPAPYFSYPQ QISSSHNVYT ANKSYGTPHS SFDLQPDEEL  420
IDKIVTEARR KPWSPLPLGL KRPSPESVLK ELSKQGISTV PPRINGSKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	2e-68	ARR-B family protein