PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533371.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 471aa MW: 52805.9 Da PI: 6.8671

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.3	7.1e-28	236	289	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533371.1 236 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 289 6799***************.******************************8 PP
2	Myb_DNA-binding	42.4	1.6e-13	239	288	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533371.1 239 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 288 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MMVERGKRLQ LRRMFVDAAK SCIFHLTSDV YCLSTMMKCI ALGAVEFLLK PLSEDKLKNI 60 WQHVLHKAFS STPMPEVDSA ASLMQLQLES EDNNGVLGDT EGLSWIQDIV WEQEQPNGSV 120 KSQLNQGSSL QGCWESGDQM NCPMETDCSD KDVQSNFVET TSHDLVCEDT LQECQPRLSG 180 KVMVKEDENS AVGLNAESDI YLPLQNKCGV KSGPSAVEHS IQGSDVNPSA GSKSKKTKVD 240 WSPELHRKFI QAVEQLGIDR AIPSKILELM KVEGLTRHNV ASHLQKYRMQ KKHAVHREEN 300 PRFSMLTNHL KPNMAYPSYY PYCGISMSTV YRTWTQNNGQ PANVNMWGPP DYRHWPQPGT 360 QPWNSYAGMQ ADAWGCPVML PSPAPYFSYP QQISSSHNVY TANKSYGTPH SSFDLQPDEE 420 LIDKIVTEAR RKPWSPLPLG LKRPSPESVL KELSKQGIST VPPRINGSKP P

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MMVERGKRLQ LRRMFVDAAK SCIFHLTSDV YCLSTMMKCI ALGAVEFLLK PLSEDKLKNI  60
WQHVLHKAFS STPMPEVDSA ASLMQLQLES EDNNGVLGDT EGLSWIQDIV WEQEQPNGSV  120
KSQLNQGSSL QGCWESGDQM NCPMETDCSD KDVQSNFVET TSHDLVCEDT LQECQPRLSG  180
KVMVKEDENS AVGLNAESDI YLPLQNKCGV KSGPSAVEHS IQGSDVNPSA GSKSKKTKVD  240
WSPELHRKFI QAVEQLGIDR AIPSKILELM KVEGLTRHNV ASHLQKYRMQ KKHAVHREEN  300
PRFSMLTNHL KPNMAYPSYY PYCGISMSTV YRTWTQNNGQ PANVNMWGPP DYRHWPQPGT  360
QPWNSYAGMQ ADAWGCPVML PSPAPYFSYP QQISSSHNVY TANKSYGTPH SSFDLQPDEE  420
LIDKIVTEAR RKPWSPLPLG LKRPSPESVL KELSKQGIST VPPRINGSKP P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-63	ARR-B family protein