PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533370.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 500aa MW: 55935.3 Da PI: 5.9955

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.2	7.8e-28	265	318	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533370.1 265 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 318 6799***************.******************************8 PP
2	Myb_DNA-binding	42.3	1.7e-13	268	317	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533370.1 268 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 317 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MLHIAVYYCN DEKEALSAIM NTPENFHIAI LEMCKGNYDE SFKLLGSSKD LPIIMTSDVY 60 CLSTMMKCIA LGAVEFLLKP LSEDKLKNIW QHVLHKAFSS TPMPEVDSAA SLMQLQLESE 120 DNNGVLGDTE GLSWIQDIVW EQEQPNGSVK SQLNQGSSLQ GCWESGDQMN CPMETDCSDK 180 DVQSNFVETT SHDLVCEDTL QECQPRLSGK VMVKEDENSA VGLNAESDIY LPLQNKCGVK 240 SGPSAVEHSI QGSDVNPSAG SKSKKTKVDW SPELHRKFIQ AVEQLGIDRA IPSKILELMK 300 VEGLTRHNVA SHLQKYRMQK KHAVHREENP RFSMLTNHLK PNMAYPSYYP YCGISMSTVY 360 RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ PWNSYAGMQA DAWGCPVMLP SPAPYFSYPQ 420 QISSSHNVYT ANKSYGTPHS SFDLQPDEEL IDKIVTEARR KPWSPLPLGL KRPSPESVLK 480 ELSKQGISTV PPRINGSKPP

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MLHIAVYYCN DEKEALSAIM NTPENFHIAI LEMCKGNYDE SFKLLGSSKD LPIIMTSDVY  60
CLSTMMKCIA LGAVEFLLKP LSEDKLKNIW QHVLHKAFSS TPMPEVDSAA SLMQLQLESE  120
DNNGVLGDTE GLSWIQDIVW EQEQPNGSVK SQLNQGSSLQ GCWESGDQMN CPMETDCSDK  180
DVQSNFVETT SHDLVCEDTL QECQPRLSGK VMVKEDENSA VGLNAESDIY LPLQNKCGVK  240
SGPSAVEHSI QGSDVNPSAG SKSKKTKVDW SPELHRKFIQ AVEQLGIDRA IPSKILELMK  300
VEGLTRHNVA SHLQKYRMQK KHAVHREENP RFSMLTNHLK PNMAYPSYYP YCGISMSTVY  360
RTWTQNNGQP ANVNMWGPPD YRHWPQPGTQ PWNSYAGMQA DAWGCPVMLP SPAPYFSYPQ  420
QISSSHNVYT ANKSYGTPHS SFDLQPDEEL IDKIVTEARR KPWSPLPLGL KRPSPESVLK  480
ELSKQGISTV PPRINGSKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	2e-79	ARR-B family protein