PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533369.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 514aa MW: 57711.3 Da PI: 6.0013

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.1	8.1e-28	279	332	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533369.1 279 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 332 6799***************.******************************8 PP
2	Myb_DNA-binding	42.2	1.8e-13	282	331	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533369.1 282 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 331 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEISAKLEEM EHVVYYCNDE KEALSAIMNT 60 PENFHIAILE MCKGNYDESF KLLGSSKDLP IIMTSDVYCL STMMKCIALG AVEFLLKPLS 120 EDKLKNIWQH VLHKAFSSTP MPEVDSAASL MQLQLESEDN NGVLGDTEGL SWIQDIVWEQ 180 EQPNGSVKSQ LNQGSSLQGC WESGDQMNCP METDCSDKDV QSNFVETTSH DLVCEDTLQE 240 CQPRLSGKNK CGVKSGPSAV EHSIQGSDVN PSAGSKSKKT KVDWSPELHR KFIQAVEQLG 300 IDRAIPSKIL ELMKVEGLTR HNVASHLQKY RMQKKHAVHR EENPRFSMLT NHLKPNMAYP 360 SYYPYCGISM STVYRTWTQN NGQPANVNMW GPPDYRHWPQ PGTQPWNSYA GMQADAWGCP 420 VMLPSPAPYF SYPQQISSSH NVYTANKSYG TPHSSFDLQP DEELIDKIVT EARRKPWSPL 480 PLGLKRPSPE SVLKELSKQG ISTVPPRING SKPP

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEISAKLEEM EHVVYYCNDE KEALSAIMNT  60
PENFHIAILE MCKGNYDESF KLLGSSKDLP IIMTSDVYCL STMMKCIALG AVEFLLKPLS  120
EDKLKNIWQH VLHKAFSSTP MPEVDSAASL MQLQLESEDN NGVLGDTEGL SWIQDIVWEQ  180
EQPNGSVKSQ LNQGSSLQGC WESGDQMNCP METDCSDKDV QSNFVETTSH DLVCEDTLQE  240
CQPRLSGKNK CGVKSGPSAV EHSIQGSDVN PSAGSKSKKT KVDWSPELHR KFIQAVEQLG  300
IDRAIPSKIL ELMKVEGLTR HNVASHLQKY RMQKKHAVHR EENPRFSMLT NHLKPNMAYP  360
SYYPYCGISM STVYRTWTQN NGQPANVNMW GPPDYRHWPQ PGTQPWNSYA GMQADAWGCP  420
VMLPSPAPYF SYPQQISSSH NVYTANKSYG TPHSSFDLQP DEELIDKIVT EARRKPWSPL  480
PLGLKRPSPE SVLKELSKQG ISTVPPRING SKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	7e-88	ARR-B family protein