PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533364.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 538aa MW: 60328.2 Da PI: 5.4776

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.1	8.6e-28	303	356	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_023533364.1 303 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 356 6799***************.******************************8 PP
2	Myb_DNA-binding	42.2	1.9e-13	306	355	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023533364.1 306 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 355 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEISAKLEEM EHVVYYCNDE KEALSAIMNT 60 PENFHIAILE MCKGNYDESF KLLGSSKDLP IIMTSDVYCL STMMKCIALG AVEFLLKPLS 120 EDKLKNIWQH VLHKAFSSTP MPEVDSAASL MQLQLESEDN NGVLGDTEGL SWIQDIVWEQ 180 EQPNGSVKSQ LNQGSSLQGC WESGDQMNCP METDCSDKDV QSNFVETTSH DLVCEDTLQE 240 CQPRLSGKVM VKEDENSAVG LNAESDIYLP LQNKCGVKSG PSAVEHSIQG SDVNPSAGSK 300 SKKTKVDWSP ELHRKFIQAV EQLGIDRAIP SKILELMKVE GLTRHNVASH LQKYRMQKKH 360 AVHREENPRF SMLTNHLKPN MAYPSYYPYC GISMSTVYRT WTQNNGQPAN VNMWGPPDYR 420 HWPQPGTQPW NSYAGMQADA WGCPVMLPSP APYFSYPQQI SSSHNVYTAN KSYGTPHSSF 480 DLQPDEELID KIVTEARRKP WSPLPLGLKR PSPESVLKEL SKQGISTVPP RINGSKPP

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEISAKLEEM EHVVYYCNDE KEALSAIMNT  60
PENFHIAILE MCKGNYDESF KLLGSSKDLP IIMTSDVYCL STMMKCIALG AVEFLLKPLS  120
EDKLKNIWQH VLHKAFSSTP MPEVDSAASL MQLQLESEDN NGVLGDTEGL SWIQDIVWEQ  180
EQPNGSVKSQ LNQGSSLQGC WESGDQMNCP METDCSDKDV QSNFVETTSH DLVCEDTLQE  240
CQPRLSGKVM VKEDENSAVG LNAESDIYLP LQNKCGVKSG PSAVEHSIQG SDVNPSAGSK  300
SKKTKVDWSP ELHRKFIQAV EQLGIDRAIP SKILELMKVE GLTRHNVASH LQKYRMQKKH  360
AVHREENPRF SMLTNHLKPN MAYPSYYPYC GISMSTVYRT WTQNNGQPAN VNMWGPPDYR  420
HWPQPGTQPW NSYAGMQADA WGCPVMLPSP APYFSYPQQI SSSHNVYTAN KSYGTPHSSF  480
DLQPDEELID KIVTEARRKP WSPLPLGLKR PSPESVLKEL SKQGISTVPP RINGSKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	4e-89	ARR-B family protein