PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533212.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 303aa MW: 32754.3 Da PI: 8.8036

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533212.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	109.5	4.9e-34	49	135	1	79
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....ssssasec....eaesss 79 a+g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+ l + s ++++ + e+++ss XP_023533212.1 49 ATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLppcpSEPDPNGTggvtEHSESS 135 589**************************************************************7665222223333331222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MNSDGGGEEL NKTGLHQGRR RPRMGMQSIS GGEILQVPGG GCGGVIVRAT GRKDRHSKVF 60 TAKGLRDRRV RLSAHTAIQF YDVQDRLGYD RPSKAVDWLI KKAKSAIDSL SHLPPCPSEP 120 DPNGTGGVTE HSESSRYNDF LFQSQLGENL IPPPLDSAAG FQSYQNLGLS LQTQNSPHHD 180 QNQTGLYAAG SGNSGLGFED GFEKIVAWNS NVFGSHPSFS QCSAAFPLRG PLQSSLESPV 240 PHYAWNELAV EPTGKRHPIP VHDNSSPSSP RFISGGLPHL DVHGRFQSDG GKVPSHSSLY 300 SRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	3e-38	TCP family protein